SOPHiA DDM™ Enhanced Exome Solutions

One workflow, a universe of answers
Home breadcrumb-arrow SOPHiA DDM™ for Genomics breadcrumb-arrow Inherited Disorders breadcrumb-arrow SOPHiA DDM™ Enhanced Exome Solutions

Boost laboratory efficiency without compromising quality

Detect challenging variants across multiple indications with one comprehensive application that eliminates the need for multiple targeted tests. Reduce hands-on time, lower costs, and future-proof your genomic analysis with a single streamlined workflow.

SOPHiA DDM™ Enhanced Exome Solutions combine a trusted exome backbone with targeted probe and analytical enhancements to increase sensitivity and enable complex variant detection. One efficient workflow supports carrier screening, pharmacogenomics, and hereditary cancer applications.

Contact Us
Consolidated workflows

Reduce hands-on time by eliminating send-outs and covering carrier screening, PGx, and hereditary cancer indications in a single workflow.

Futureproofed genomic analysis
Avoid panel re-design iterations and enable reflex testing by simply editing gene lists through virtual panels.
Challenging variant detection
Utilize dedicated algorithms to detect variants such as CNVs, Alu insertions, mosaic variants, star alleles, gene/pseudogene pairs, and Boland inversions.
Advanced analytical performance
Leverage extensive expertise in probe design and data science to achieve the same sensitivity as targeted panels with this comprehensive application.
Streamlined variant interpretation
Robust CYP2D6 assessment
Quickly interpret results with extensive variant annotation complemented by time-saving prioritization, filtering, and visualization.
Join the SOPHiA DDM™ Community
Benefit from indication-specific community knowledge-sharing for more informed variant interpretation while retaining control of your data.

Streamline your variant detection and analysis workflow

Boost lab efficiency with a single streamlined end-to-end NGS workflow. Perform next-generation sequencing in house, or leverage SOPHiA DDM Integrated Access Mode to tap into a global network of sequencing labs. All variant detection and interpretation steps are powered by the SOPHiA DDM™ Platform, giving you full control over your data and samples.
Easy library preparation and capture
  • 146 gene panel focused on actionability, curated by MSK experts and selected from MSK’s cancer genomic profiling assay, MSK-IMPACT®
  • Hybridization-based capture with deep sequencing (~20,000x)
  • Tailored probes for high on-target rate and coverage uniformity
  • Minimal input amount of only 20 ng cfDNA
  • Ready-to-sequence libraries in just 1.5 days
  • Optimized multiplexing of paired tumor-normal samples for a cost-effective process
  • Compatible with NovaSeq™ 6000 and NextSeq® 2000 sequencers
Advanced analysis with the SOPHiA DDM™ Platform
  • Algorithm-powered detection of SNVs, Indels, CNV, and fusions
  • Proprietary unique molecular identifier (UMI) technology, CUMIN™, for sensitive variant detection down to 0.5% VAF
  • Tumor-informed variant calling to facilitate follow-ups and decision-making
  • Tertiary analysis based on the latest scientific evidence on relevant variants with OncoPortal™ Plus​
  • Access to MSK’s Precision Oncology Knowledge Base, OncoKB™, via link-out at gene level for enhanced interpretation support
  • Knowledge-sharing within SOPHiA GENETICS Community, one of the largest networks of connected healthcare institutions
You won’t be left alone.
Enjoy comprehensive support at every step through the SOPHiA DDM™ MaxCare Program, making in-house adoption a breeze.

Your exome, your way

Add targeted probe and analytical enhancements to standard SOPHiA DDM™ Exome Solutions to create the Enhanced Exome Solution that meets the specific needs of your institution.
Contact Us

Application Specifications

Clinical Exome Whole Exome
Exome backbone content 6,380 genes
Mitochondrial genome
~200 non-coding variants with known pathogenicity
19,425 genes
Mitochondrial genome
Hereditary cancer enhancement 140* genes
Pharmacogenomics enhancement 74 genes
Carrier screening enhancement 155 genes
Detected variants General: SNVs, Indels, CNVs, mitochondrial variants, Alu insertions, star alleles
Specific: Large deletions in HBA1/HBA2, gene/pseudogene analysis (CYP21A2, CYP2D6, HBA1, PMS2, SMN1, TNXB), Boland inversions, CFTR repeat regions
Sample type Blood
Starting material 50 ng DNA
Panel size (with 3 enhancements) ~16.5 Mb ~43 Mb
Multiplexing (with 3 enhancements)
Max number of samples per lane for 30M (clinical exome)/80M (whole exome) reads per sample
NextSeq® 550, high-output – 24
NextSeq® 550, mid-output – 8
NextSeq® 1000/2000, P2 XLEAP – 24
NextSeq® 1000/2000, P4 XLEAP – 120
NovaSeq™ S2 (1 lane) – 120
NovaSeq™ S4 (1 lane) – 144
NextSeq® 550, high-output – 8
NextSeq® 1000/2000, P2 XLEAP – 8
NextSeq® 1000/2000, P4 XLEAP – 40
NovaSeq™ S2 (1 lane) – 48
NovaSeq™ S4 (1 lane) – 60
Library prep time 2 days

*Enhancements are added for 94 genes; the rest are already covered by the exome backbone.

SOPHiA GENETICS products are for Research Use Only and not for use in diagnostic procedures unless specified otherwise.

SOPHiA DDM™ Dx Hereditary Cancer Solution, SOPHiA DDM™ Dx RNAtarget Oncology Solution and SOPHiA DDM™ Dx Homologous Recombination Deficiency Solution are available as CE-IVD products for In Vitro Diagnostic Use in the European Economic Area (EEA), the United Kingdom and Switzerland. SOPHiA DDM™ Dx Myeloid Solution and SOPHiA DDM™ Dx Solid Tumor Solution are available as CE-IVD products for In Vitro Diagnostic Use in the EEA, the United Kingdom, Switzerland, and Israel. Information about products that may or may not be available in different countries and if applicable, may or may not have received approval or market clearance by a governmental regulatory body for different indications for use. Please contact us to obtain the appropriate product information for your country of residence.

All third-party trademarks listed by SOPHiA GENETICS remain the property of their respective owners. Unless specifically identified as such, SOPHiA GENETICS’ use of third-party trademarks does not indicate any relationship, sponsorship, or endorsement between SOPHiA GENETICS and the owners of these trademarks. Any references by SOPHiA GENETICS to third-party trademarks is to identify the corresponding third-party goods and/or services and shall be considered nominative fair use under the trademark law.

SOPHiA DDM™ Overview
Unlocking Insights, Transforming Healthcare
Learn About SOPHiA DDM™ 
SOPHiA DDM™ for Genomics

Oncology 

Rare and Inherited Disorders

Add-On Modules

SOPHiA DDM™ for Radiomics
Unlock entirely novel insights from your radiology images
Learn About SOPHiA DDM™ for Radiomics 
SOPHiA DDM™ for Multimodal
Explore new frontiers in biology and disease through novel insights
Learn About SOPHiA DDM™ for Multimodal
Professional Services
Accelerate breakthroughs with our tailored enablement services
Learn About our Professional Services